STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB20106.1CYTH domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)    
Predicted Functional Partners:
ANB22387.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
ANB22695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
ANB23423.1
DNA mismatch repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.649
A6K25_10845
Bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
yihI
GTPase-activating protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
   
 0.629
ANB22451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.626
bamC
Outer membrane assembly protein BamC; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.604
ANB20285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
ANB20221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.597
ANB22828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.591
Your Current Organism:
Alteromonas stellipolaris
NCBI taxonomy Id: 233316
Other names: A. stellipolaris, Alteromonas stellaepolaris, Alteromonas stellipolaris Van Trappen et al. 2004, DSM 15691, LMG 21861, LMG:21861, strain ANT 69a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.