STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB20746.1General secretion pathway protein GspM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (159 aa)    
Predicted Functional Partners:
ANB20747.1
Type II secretion system protein GspL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.996
ANB20748.1
Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
ANB20749.1
Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
ANB20745.1
General secretion pathway protein GspN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.951
ANB23480.1
General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.946
ANB20750.1
Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.945
ANB20751.1
Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.888
ANB20752.1
Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.833
ANB20754.1
Type II secretion system protein GspC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.822
A6K25_05315
Type II secretion system protein GspE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.783
Your Current Organism:
Alteromonas stellipolaris
NCBI taxonomy Id: 233316
Other names: A. stellipolaris, Alteromonas stellaepolaris, Alteromonas stellipolaris Van Trappen et al. 2004, DSM 15691, LMG 21861, LMG:21861, strain ANT 69a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.