STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB22517.1Sulfur reduction protein DsrE; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)    
Predicted Functional Partners:
ANB22516.1
Sulfur relay protein TusD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ANB22518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ANB22519.1
Sulfur relay protein TusE; Part of a sulfur-relay system.
  
  
 0.665
ANB22515.1
BAX inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.
       0.566
ANB22389.1
Nucleoid-associated protein YejK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.538
ANB22694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
ANB21179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
ANB23638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
ANB21982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
Your Current Organism:
Alteromonas stellipolaris
NCBI taxonomy Id: 233316
Other names: A. stellipolaris, Alteromonas stellaepolaris, Alteromonas stellipolaris Van Trappen et al. 2004, DSM 15691, LMG 21861, LMG:21861, strain ANT 69a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.