STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HD_0254Conserved hypothetical protein; Belongs to the BolA/IbaG family. (86 aa)    
Predicted Functional Partners:
HD_0255
Putative anti-sigma factor B antagonist.
       0.786
HD_0256
Conserved hypothetical protein.
       0.786
murA
UDP-N-Acetyllglucosamine- 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.630
HD_0258
Probable permease.
 
     0.625
grxD
Conserved glutaredoxin-like protein; Monothiol glutaredoxin involved in the biogenesis of iron- sulfur clusters.
 
 
 
 0.607
HD_0259
ABC transporter ATP binding protein.
 
   
 0.592
HD_0257
Conserved hypothetical protein.
     
 0.559
sixA
Possible phosphohistidine phosphatase; Belongs to the phosphoglycerate mutase family.
  
     0.427
HD_1903
Conserved hypothetical protein; Belongs to the DsrF/TusC family.
  
     0.416
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.