Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
HD_0518 | HD_0519 | Bacteriophage Mu I protein GP32. | Bacteriophage mu T protein-like protein. | 0.950 |
HD_0518 | HD_0520 | Bacteriophage Mu I protein GP32. | Hypothetical protein. | 0.623 |
HD_0518 | HD_0521 | Bacteriophage Mu I protein GP32. | Conserved hypothetical protein. | 0.913 |
HD_0518 | HD_0522 | Bacteriophage Mu I protein GP32. | Hypothetical protein. | 0.623 |
HD_0518 | HD_0523 | Bacteriophage Mu I protein GP32. | Hypothetical protein. | 0.549 |
HD_0518 | HD_0525 | Bacteriophage Mu I protein GP32. | Hypothetical protein. | 0.433 |
HD_0519 | HD_0518 | Bacteriophage mu T protein-like protein. | Bacteriophage Mu I protein GP32. | 0.950 |
HD_0519 | HD_0520 | Bacteriophage mu T protein-like protein. | Hypothetical protein. | 0.623 |
HD_0519 | HD_0521 | Bacteriophage mu T protein-like protein. | Conserved hypothetical protein. | 0.913 |
HD_0519 | HD_0522 | Bacteriophage mu T protein-like protein. | Hypothetical protein. | 0.623 |
HD_0519 | HD_0523 | Bacteriophage mu T protein-like protein. | Hypothetical protein. | 0.600 |
HD_0519 | HD_0525 | Bacteriophage mu T protein-like protein. | Hypothetical protein. | 0.433 |
HD_0520 | HD_0518 | Hypothetical protein. | Bacteriophage Mu I protein GP32. | 0.623 |
HD_0520 | HD_0519 | Hypothetical protein. | Bacteriophage mu T protein-like protein. | 0.623 |
HD_0520 | HD_0521 | Hypothetical protein. | Conserved hypothetical protein. | 0.773 |
HD_0520 | HD_0522 | Hypothetical protein. | Hypothetical protein. | 0.773 |
HD_0520 | HD_0523 | Hypothetical protein. | Hypothetical protein. | 0.675 |
HD_0520 | HD_0525 | Hypothetical protein. | Hypothetical protein. | 0.525 |
HD_0521 | HD_0518 | Conserved hypothetical protein. | Bacteriophage Mu I protein GP32. | 0.913 |
HD_0521 | HD_0519 | Conserved hypothetical protein. | Bacteriophage mu T protein-like protein. | 0.913 |
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