STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxyRHydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
HD_0698
Possible tetR family transcriptional regulator.
   
 
 0.802
HD_0697
Thioredoxin-like protein.
     
 0.774
HD_0700
Putative peroxiredoxin/glutaredoxin family protein.
     
 0.715
fis
DNA-binding protein; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.
  
   
 0.667
sodA
Manganese superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the iron/manganese superoxide dismutase family.
     
 0.641
sodC
Superoxide dismutase (Cu-Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May play a role in the interactive biology of organisms with their hosts and so contribute to their capacity to cause disease; Belongs to the Cu-Zn superoxide dismutase family.
      
 0.638
HD_0694
Hypothetical protein.
       0.592
vacB
Ribonuclease r, virulence associated protein VacB-like protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
       0.592
gcvA
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.574
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.