Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HD_0793 | HD_0794 | HD_0793 | HD_0794 | Putative transport system permease protein. | Hypothetical protein. | 0.773 |
| HD_0793 | HD_0795 | HD_0793 | HD_0795 | Putative transport system permease protein. | Probable thiosulfate sulfur transferase. | 0.793 |
| HD_0793 | ccmE | HD_0793 | HD_0791 | Putative transport system permease protein. | Cytochrome c-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.478 |
| HD_0793 | ccmF | HD_0793 | HD_0792 | Putative transport system permease protein. | Cytochrome c-type biogenesis protein. | 0.486 |
| HD_0794 | HD_0793 | HD_0794 | HD_0793 | Hypothetical protein. | Putative transport system permease protein. | 0.773 |
| HD_0794 | HD_0795 | HD_0794 | HD_0795 | Hypothetical protein. | Probable thiosulfate sulfur transferase. | 0.773 |
| HD_0794 | ccmE | HD_0794 | HD_0791 | Hypothetical protein. | Cytochrome c-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.478 |
| HD_0794 | ccmF | HD_0794 | HD_0792 | Hypothetical protein. | Cytochrome c-type biogenesis protein. | 0.478 |
| HD_0795 | HD_0793 | HD_0795 | HD_0793 | Probable thiosulfate sulfur transferase. | Putative transport system permease protein. | 0.793 |
| HD_0795 | HD_0794 | HD_0795 | HD_0794 | Probable thiosulfate sulfur transferase. | Hypothetical protein. | 0.773 |
| HD_0795 | ccmE | HD_0795 | HD_0791 | Probable thiosulfate sulfur transferase. | Cytochrome c-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.478 |
| HD_0795 | ccmF | HD_0795 | HD_0792 | Probable thiosulfate sulfur transferase. | Cytochrome c-type biogenesis protein. | 0.478 |
| ccmA | ccmB | HD_0786 | HD_0787 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.999 |
| ccmA | ccmC | HD_0786 | HD_0789 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.997 |
| ccmA | ccmD | HD_0786 | HD_0790 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c maturation protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.821 |
| ccmA | ccmE | HD_0786 | HD_0791 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.918 |
| ccmA | ccmF | HD_0786 | HD_0792 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein. | 0.826 |
| ccmA | dsbE1 | HD_0786 | HD_0058 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Probable thiol:disulfide interchange protein DsbE. | 0.727 |
| ccmA | dsbE2 | HD_0786 | HD_0616 | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Possible thiol:disulfide interchange protein DsbE. | 0.707 |
| ccmB | ccmA | HD_0787 | HD_0786 | Cytochrome c-type biogenesis protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Cytochrome c-type biogenesis ATP-binding protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.999 |
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