STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sprTProbable SprT protein; Belongs to the SprT family. (166 aa)    
Predicted Functional Partners:
HD_0876
Conserved probable ribonuclease; Belongs to the RNase T2 family.
       0.774
lapA
Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.710
HD_0718
Conserved hypothetical protein.
  
     0.620
HD_1515
Conserved hypothetical protein; Belongs to the UPF0352 family.
  
     0.617
ndh
NADH dehydrogenase.
       0.553
HD_1003
Conserved hypothetical protein.
  
     0.552
HD_1903
Conserved hypothetical protein; Belongs to the DsrF/TusC family.
  
     0.536
sixA
Possible phosphohistidine phosphatase; Belongs to the phosphoglycerate mutase family.
  
     0.534
HD_1516
Putative sulphatase.
  
     0.532
sppA
Protease IV, signal peptide peptidase.
       0.505
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.