STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rec2Recombination protein 2. (762 aa)    
Predicted Functional Partners:
smf
Smf protein; DNA processing chain A.
 
  
 0.863
comF
Competence protein F.
 
  
 0.853
hofC
Pili/fimbriae biogenesis protein.
  
  
 0.824
HD_1126
Hypothetical protein.
  
  
 0.759
hofB
Protein transport protein HofB-like protein, pili/fimbriae biogenesis protein.
 
  
 0.746
HD_0650
Conserved hypothetical protein.
 
  
 0.735
recX
Possible regulatory protein RecX-like protein; Modulates RecA activity; Belongs to the RecX family.
 
   
 0.672
sodC
Superoxide dismutase (Cu-Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. May play a role in the interactive biology of organisms with their hosts and so contribute to their capacity to cause disease; Belongs to the Cu-Zn superoxide dismutase family.
      
 0.664
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.662
ftsK
Cell division protein FtsK; Essential cell division protein that coordinates cell division and chromosome segregation. The N-terminus is involved in assembly of the cell-division machinery. The C-terminus functions as a DNA motor that moves dsDNA in an ATP-dependent manner towards the dif recombination site, which is located within the replication terminus region. Translocation stops specifically at Xer-dif sites, where FtsK interacts with the Xer recombinase, allowing activation of chromosome unlinking by recombination. FtsK orienting polar sequences (KOPS) guide the direction of DNA [...]
 
  
 0.656
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.