Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HD_1319 | HD_1320 | HD_1319 | HD_1320 | Putative integral membrane protein. | Putative integral membrane protein. | 0.994 |
HD_1319 | HD_1321 | HD_1319 | HD_1321 | Putative integral membrane protein. | Probable integral membrane protein. | 0.982 |
HD_1319 | HD_1324 | HD_1319 | HD_1324 | Putative integral membrane protein. | Hypothetical protein. | 0.513 |
HD_1319 | HD_1325 | HD_1319 | HD_1325 | Putative integral membrane protein. | Conserved hypothetical protein. | 0.498 |
HD_1319 | ispA | HD_1319 | HD_1322 | Putative integral membrane protein. | Geranyltranstransferase; Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.704 |
HD_1319 | xseB | HD_1319 | HD_1323 | Putative integral membrane protein. | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.704 |
HD_1320 | HD_1319 | HD_1320 | HD_1319 | Putative integral membrane protein. | Putative integral membrane protein. | 0.994 |
HD_1320 | HD_1321 | HD_1320 | HD_1321 | Putative integral membrane protein. | Probable integral membrane protein. | 0.981 |
HD_1320 | HD_1324 | HD_1320 | HD_1324 | Putative integral membrane protein. | Hypothetical protein. | 0.520 |
HD_1320 | HD_1325 | HD_1320 | HD_1325 | Putative integral membrane protein. | Conserved hypothetical protein. | 0.527 |
HD_1320 | ispA | HD_1320 | HD_1322 | Putative integral membrane protein. | Geranyltranstransferase; Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.714 |
HD_1320 | xseB | HD_1320 | HD_1323 | Putative integral membrane protein. | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.714 |
HD_1321 | HD_1319 | HD_1321 | HD_1319 | Probable integral membrane protein. | Putative integral membrane protein. | 0.982 |
HD_1321 | HD_1320 | HD_1321 | HD_1320 | Probable integral membrane protein. | Putative integral membrane protein. | 0.981 |
HD_1321 | HD_1324 | HD_1321 | HD_1324 | Probable integral membrane protein. | Hypothetical protein. | 0.520 |
HD_1321 | HD_1325 | HD_1321 | HD_1325 | Probable integral membrane protein. | Conserved hypothetical protein. | 0.504 |
HD_1321 | ispA | HD_1321 | HD_1322 | Probable integral membrane protein. | Geranyltranstransferase; Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.714 |
HD_1321 | xseB | HD_1321 | HD_1323 | Probable integral membrane protein. | Exodeoxyribonuclease small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.714 |
HD_1324 | HD_1319 | HD_1324 | HD_1319 | Hypothetical protein. | Putative integral membrane protein. | 0.513 |
HD_1324 | HD_1320 | HD_1324 | HD_1320 | Hypothetical protein. | Putative integral membrane protein. | 0.520 |
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