Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HD_1405 | HD_1408 | HD_1405 | HD_1408 | Hypothetical protein. | Hypothetical protein. | 0.572 |
HD_1405 | HD_1409 | HD_1405 | HD_1409 | Hypothetical protein. | Conserved hypothetical protein. | 0.467 |
HD_1405 | efp | HD_1405 | HD_1407 | Hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.773 |
HD_1408 | HD_1405 | HD_1408 | HD_1405 | Hypothetical protein. | Hypothetical protein. | 0.572 |
HD_1408 | HD_1409 | HD_1408 | HD_1409 | Hypothetical protein. | Conserved hypothetical protein. | 0.620 |
HD_1408 | HD_1410 | HD_1408 | HD_1410 | Hypothetical protein. | Conserved hypothetical protein. | 0.470 |
HD_1408 | efp | HD_1408 | HD_1407 | Hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.572 |
HD_1409 | HD_1405 | HD_1409 | HD_1405 | Conserved hypothetical protein. | Hypothetical protein. | 0.467 |
HD_1409 | HD_1408 | HD_1409 | HD_1408 | Conserved hypothetical protein. | Hypothetical protein. | 0.620 |
HD_1409 | HD_1410 | HD_1409 | HD_1410 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.576 |
HD_1409 | efp | HD_1409 | HD_1407 | Conserved hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.467 |
HD_1410 | HD_1408 | HD_1410 | HD_1408 | Conserved hypothetical protein. | Hypothetical protein. | 0.470 |
HD_1410 | HD_1409 | HD_1410 | HD_1409 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.576 |
HD_1410 | efp | HD_1410 | HD_1407 | Conserved hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.839 |
efp | HD_1405 | HD_1407 | HD_1405 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Hypothetical protein. | 0.773 |
efp | HD_1408 | HD_1407 | HD_1408 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Hypothetical protein. | 0.572 |
efp | HD_1409 | HD_1407 | HD_1409 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Conserved hypothetical protein. | 0.467 |
efp | HD_1410 | HD_1407 | HD_1410 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Conserved hypothetical protein. | 0.839 |