STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HD_1520Conserved hypothetical protein. (158 aa)    
Predicted Functional Partners:
HD_1529
Hypothetical protein.
 
     0.892
HD_1530
Hypothetical protein.
 
     0.889
gam
Putative mu-phage host-nuclease inhibitor protein.
 
     0.885
HD_1518
Hypothetical protein.
 
     0.882
HD_1528
Eha protein.
 
     0.847
HD_1517
Hypothetical protein.
 
     0.803
HD_1519
Hypothetical protein.
       0.775
HD_1555
Bacteriophage Mu GP28-like protein.
 
     0.730
HD_1559
Conserved hypothetical protein.
  
     0.712
HD_0509
Conserved possible DNA-binding protein.
  
     0.704
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.