Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HD_1029 | guaB | HD_1029 | HD_1503 | Putative haloacid dehalogenase-like hydrolase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.924 |
HD_1029 | hpt | HD_1029 | HD_1399 | Putative haloacid dehalogenase-like hydrolase. | Hypoxanthine phosphoribosyl transferase (HPRT); Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.900 |
HD_1029 | purA | HD_1029 | HD_1807 | Putative haloacid dehalogenase-like hydrolase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.905 |
HD_1029 | purB | HD_1029 | HD_1649 | Putative haloacid dehalogenase-like hydrolase. | Adenylosuccinate lyase; Adenylosuccinase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.900 |
HD_1029 | purH | HD_1029 | HD_1703 | Putative haloacid dehalogenase-like hydrolase. | Bifunctional purine biosynthesis protein, N-terminal truncated. | 0.902 |
HD_1029 | surE | HD_1029 | HD_0758 | Putative haloacid dehalogenase-like hydrolase. | Acid phosphatase stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.903 |
ansB | argG | HD_0372 | HD_1204 | L-asparaginase II; Belongs to the asparaginase 1 family. | Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.903 |
ansB | aspA | HD_0372 | HD_0564 | L-asparaginase II; Belongs to the asparaginase 1 family. | Aspartate ammonia-lyase. | 0.959 |
ansB | aspC | HD_0372 | HD_1419 | L-asparaginase II; Belongs to the asparaginase 1 family. | Aspartate aminotransferase; Transaminase A; ASPAT. | 0.902 |
ansB | purA | HD_0372 | HD_1807 | L-asparaginase II; Belongs to the asparaginase 1 family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
argG | ansB | HD_1204 | HD_0372 | Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | L-asparaginase II; Belongs to the asparaginase 1 family. | 0.903 |
argG | aspA | HD_1204 | HD_0564 | Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Aspartate ammonia-lyase. | 0.810 |
argG | aspC | HD_1204 | HD_1419 | Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Aspartate aminotransferase; Transaminase A; ASPAT. | 0.915 |
argG | purA | HD_1204 | HD_1807 | Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.940 |
aspA | ansB | HD_0564 | HD_0372 | Aspartate ammonia-lyase. | L-asparaginase II; Belongs to the asparaginase 1 family. | 0.959 |
aspA | argG | HD_0564 | HD_1204 | Aspartate ammonia-lyase. | Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.810 |
aspA | aspC | HD_0564 | HD_1419 | Aspartate ammonia-lyase. | Aspartate aminotransferase; Transaminase A; ASPAT. | 0.900 |
aspA | purA | HD_0564 | HD_1807 | Aspartate ammonia-lyase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.901 |
aspA | purB | HD_0564 | HD_1649 | Aspartate ammonia-lyase. | Adenylosuccinate lyase; Adenylosuccinase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.901 |
aspC | ansB | HD_1419 | HD_0372 | Aspartate aminotransferase; Transaminase A; ASPAT. | L-asparaginase II; Belongs to the asparaginase 1 family. | 0.902 |
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