Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HD_1859 | HD_1861 | HD_1859 | HD_1861 | PTS system Enzyme II-A permease component. | Conserved hypothetical protein. | 0.975 |
HD_1859 | sgaH | HD_1859 | HD_1857 | PTS system Enzyme II-A permease component. | Probable hexulose-6-phosphate synthase; D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | 0.889 |
HD_1859 | sgaT | HD_1859 | HD_1860 | PTS system Enzyme II-A permease component. | Putative PTS system Enzyme II sga subunit. | 0.996 |
HD_1859 | sgbU | HD_1859 | HD_1864 | PTS system Enzyme II-A permease component. | Putative hexulose-6-phosphate isomerase (HUMPI). | 0.764 |
HD_1861 | HD_1859 | HD_1861 | HD_1859 | Conserved hypothetical protein. | PTS system Enzyme II-A permease component. | 0.975 |
HD_1861 | HD_1863 | HD_1861 | HD_1863 | Conserved hypothetical protein. | Probable DeoR-family transcription repressor. | 0.534 |
HD_1861 | sgaH | HD_1861 | HD_1857 | Conserved hypothetical protein. | Probable hexulose-6-phosphate synthase; D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | 0.979 |
HD_1861 | sgaT | HD_1861 | HD_1860 | Conserved hypothetical protein. | Putative PTS system Enzyme II sga subunit. | 0.989 |
HD_1861 | sgbE | HD_1861 | HD_1866 | Conserved hypothetical protein. | L-ribulose-phosphate-4-epimerase. | 0.448 |
HD_1861 | sgbU | HD_1861 | HD_1864 | Conserved hypothetical protein. | Putative hexulose-6-phosphate isomerase (HUMPI). | 0.858 |
HD_1863 | HD_1861 | HD_1863 | HD_1861 | Probable DeoR-family transcription repressor. | Conserved hypothetical protein. | 0.534 |
HD_1863 | sgaT | HD_1863 | HD_1860 | Probable DeoR-family transcription repressor. | Putative PTS system Enzyme II sga subunit. | 0.602 |
HD_1863 | sgbE | HD_1863 | HD_1866 | Probable DeoR-family transcription repressor. | L-ribulose-phosphate-4-epimerase. | 0.574 |
HD_1863 | sgbU | HD_1863 | HD_1864 | Probable DeoR-family transcription repressor. | Putative hexulose-6-phosphate isomerase (HUMPI). | 0.553 |
sgaH | HD_1859 | HD_1857 | HD_1859 | Probable hexulose-6-phosphate synthase; D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | PTS system Enzyme II-A permease component. | 0.889 |
sgaH | HD_1861 | HD_1857 | HD_1861 | Probable hexulose-6-phosphate synthase; D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | Conserved hypothetical protein. | 0.979 |
sgaH | sgaT | HD_1857 | HD_1860 | Probable hexulose-6-phosphate synthase; D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | Putative PTS system Enzyme II sga subunit. | 0.940 |
sgaH | sgbU | HD_1857 | HD_1864 | Probable hexulose-6-phosphate synthase; D-arabino 3-hexulose 6-phosphate formaldehyde lyase. | Putative hexulose-6-phosphate isomerase (HUMPI). | 0.981 |
sgaT | HD_1859 | HD_1860 | HD_1859 | Putative PTS system Enzyme II sga subunit. | PTS system Enzyme II-A permease component. | 0.996 |
sgaT | HD_1861 | HD_1860 | HD_1861 | Putative PTS system Enzyme II sga subunit. | Conserved hypothetical protein. | 0.989 |
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