Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
HD_2032Amino acid ABC transporter, ATP-binding protein. (252 aa)    
Predicted Functional Partners:
HD_2033
Amino-acid ABC transporter permease protein.
 0.999
HD_2035
Amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.991
sapD
Peptide transport system ATP binding protein SapD; Belongs to the ABC transporter superfamily.
 
     
0.899
artI
Arginine ABC transporter, periplasmic-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.863
artQ
Arginine transport system permease protein.
 
   
 0.787
artM
Arginine transport system permease protein.
 
  
 0.786
msbA
ABC transporter ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
     
0.517
argG
Argininosuccinate synthetase; Citrulline--aspartate ligase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
  
  
 0.499
HD_2030
Hypothetical protein.
       0.488
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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