STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HD_2033Amino-acid ABC transporter permease protein. (238 aa)    
Predicted Functional Partners:
HD_2032
Amino acid ABC transporter, ATP-binding protein.
 0.999
HD_2035
Amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.999
artI
Arginine ABC transporter, periplasmic-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.985
artP
Arginine ABC transporter, ATP-binding protein.
 
     0.843
artQ
Arginine transport system permease protein.
 
 
 
0.522
artM
Arginine transport system permease protein.
  
  
 
0.502
HD_0586
Putative ABC transporter ATP-binding protein.
 
   
 0.452
HD_2030
Hypothetical protein.
  
    0.436
potA
Spermidine/putrescine transport ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 
 0.404
Your Current Organism:
Haemophilus ducreyi
NCBI taxonomy Id: 233412
Other names: Haemophilus ducreyi 35000HP, Haemophilus ducreyi str. 35000HP, [. ducreyi 35000HP, [Haemophilus] ducreyi 35000HP
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