close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_02480Hypothetical protein. (258 aa)    
Predicted Functional Partners:
traV
Type IV conjugative transfer system lipoprotein TraV.
 
   
 0.951
JV46_02450
Hypothetical protein.
 
     0.950
traB
TraB pilus assembly protein.
 
     0.950
JV46_02490
Hypothetical protein.
 
     0.895
traL
Type IV conjugative transfer system protein TraL.
 
     0.895
JV46_02510
Hypothetical protein.
 
     0.776
JV46_02530
Hypothetical protein.
  
     0.774
JV46_07670
TraG-like protein; N-terminal region.
  
     0.774
JV46_07690
Conjugative relaxosome accessory transposon protein.
  
     0.774
JV46_07700
TraF-like protein.
  
     0.774
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.