STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_03250Hypothetical protein. (214 aa)    
Predicted Functional Partners:
JV46_03240
TRAP transporter; 4TM/12TM fusion protein.
     0.994
JV46_03230
Universal stress protein UspA-like protein.
 
    0.934
JV46_03260
TRAP transporter solute receptor; TAXI family.
 
    0.926
JV46_03220
CBS-domain-containing membrane protein.
       0.664
JV46_03200
UDP-N-acetylmuramyl tripeptide synthase.
       0.507
JV46_03190
Folate-dependent phosphoribosylglycinamide formyltransferase PurN.
       0.488
JV46_03270
Histone deacetylase or acetoin utilization protein.
       0.412
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.