Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JV46_03430ATPase. (213 aa)    
Predicted Functional Partners:
JV46_17330
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
  
 
 0.887
acrA3
Multidrug efflux pump AcrAB, subunit A3; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.814
JV46_14010
Glycosyltransferase.
  
 
 0.787
JV46_03420
5'-nucleotidase.
       0.773
acrB3
Multidrug efflux pump AcrAB, subunit B3; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.771
JV46_03490
Hypothetical protein.
 
     0.727
JV46_03450
Hypothetical protein.
       0.689
JV46_08230
Hypothetical protein.
 
     0.644
btuB
Outer membrane cobalamin receptor protein BtuB.
    
   0.615
JV46_13270
Hypothetical protein.
  
     0.614
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.