STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Experiments
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[Homology]
Score
JV46_05360Cytochrome c. (236 aa)    
Predicted Functional Partners:
ccoP
Cbb3-type cytochrome c oxidase CooNOQP, subunit P; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.999
JV46_24920
Cytochrome c; Mono- or di-heme variant.
  
 0.999
coxB
Aa3-type cytochrome c oxidase CoxAB, subunit B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.999
ccoN
Cbb3-type cytochrome c oxidase CooNOQP, subunit N; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
JV46_27820
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.997
JV46_10240
Hypothetical protein.
 
 0.994
qcoC
Quinol:cytochrome-c oxidoreductase bc1, subunit C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.994
soxA
Heterodimeric c-type cytochrome comple SoxAX, subunit A.
  
 0.994
qcoB
Quinol:cytochrome-c oxidoreductase bc1, subunit B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.993
JV46_28000
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.993
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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