Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
JV46_05920 | JV46_10250 | Hypothetical protein. | Transposase. | 0.572 |
JV46_05920 | JV46_10270 | Hypothetical protein. | Transposase. | 0.478 |
JV46_05920 | JV46_10280 | Hypothetical protein. | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.451 |
JV46_05920 | JV46_10290 | Hypothetical protein. | Acetyltransferase; N-acetylase of ribosomal proteins. | 0.451 |
JV46_10250 | JV46_05920 | Transposase. | Hypothetical protein. | 0.572 |
JV46_10250 | JV46_10270 | Transposase. | Transposase. | 0.636 |
JV46_10250 | JV46_10280 | Transposase. | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.597 |
JV46_10250 | JV46_10290 | Transposase. | Acetyltransferase; N-acetylase of ribosomal proteins. | 0.597 |
JV46_10270 | JV46_05920 | Transposase. | Hypothetical protein. | 0.478 |
JV46_10270 | JV46_10250 | Transposase. | Transposase. | 0.636 |
JV46_10270 | JV46_10280 | Transposase. | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.723 |
JV46_10270 | JV46_10290 | Transposase. | Acetyltransferase; N-acetylase of ribosomal proteins. | 0.723 |
JV46_10280 | JV46_05920 | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Hypothetical protein. | 0.451 |
JV46_10280 | JV46_10250 | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Transposase. | 0.597 |
JV46_10280 | JV46_10270 | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Transposase. | 0.723 |
JV46_10280 | JV46_10290 | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Acetyltransferase; N-acetylase of ribosomal proteins. | 0.783 |
JV46_10290 | JV46_05920 | Acetyltransferase; N-acetylase of ribosomal proteins. | Hypothetical protein. | 0.451 |
JV46_10290 | JV46_10250 | Acetyltransferase; N-acetylase of ribosomal proteins. | Transposase. | 0.597 |
JV46_10290 | JV46_10270 | Acetyltransferase; N-acetylase of ribosomal proteins. | Transposase. | 0.723 |
JV46_10290 | JV46_10280 | Acetyltransferase; N-acetylase of ribosomal proteins. | Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.783 |