STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_06000Cytochrome c553. (200 aa)    
Predicted Functional Partners:
JV46_05360
Cytochrome c.
 
 0.896
JV46_24920
Cytochrome c; Mono- or di-heme variant.
 
 
 0.819
qcoA
Quinol:cytochrome-c oxidoreductase bc1, subunit A.
  
 
 0.815
qcoC
Quinol:cytochrome-c oxidoreductase bc1, subunit C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.783
coxB
Aa3-type cytochrome c oxidase CoxAB, subunit B; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.755
JV46_22890
Cytochrome c5.
 
  
 0.751
qcoB
Quinol:cytochrome-c oxidoreductase bc1, subunit B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.694
JV46_08490
RDD family protein.
  
     0.589
JV46_06010
Cytochrome c553.
 
    
0.562
JV46_24550
Hypothetical protein required for cytochrome oxidase assembly.
  
  
  0.539
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.