Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| JV46_05570 | JV46_16680 | JV46_05570 | JV46_16680 | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.722 |
| JV46_05570 | JV46_28490 | JV46_05570 | JV46_28490 | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | Phosphoribulokinase. | 0.557 |
| JV46_05570 | cbbL | JV46_05570 | JV46_07630 | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.878 |
| JV46_05570 | cbbP | JV46_05570 | JV46_10890 | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | Phosphoribulokinase. | 0.629 |
| JV46_05570 | cbbS | JV46_05570 | JV46_07620 | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | Ribulose 1,5-bisphosphate carboxylase, small subunit CbbS. | 0.789 |
| JV46_07600 | JV46_29420 | JV46_07600 | JV46_29420 | Nitric oxide reductase activation protein. | Hypothetical protein. | 0.778 |
| JV46_07600 | cbbL | JV46_07600 | JV46_07630 | Nitric oxide reductase activation protein. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.752 |
| JV46_07600 | cbbQ | JV46_07600 | JV46_07610 | Nitric oxide reductase activation protein. | ATPase; CbbQ/NirQ/NorQ C-terminal. | 0.946 |
| JV46_07600 | cbbS | JV46_07600 | JV46_07620 | Nitric oxide reductase activation protein. | Ribulose 1,5-bisphosphate carboxylase, small subunit CbbS. | 0.859 |
| JV46_11750 | cbbL | JV46_11750 | JV46_07630 | Ribulose-5-phosphate 4-epimerase-like protein. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.807 |
| JV46_16680 | JV46_05570 | JV46_16680 | JV46_05570 | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | 0.722 |
| JV46_16680 | cbbL | JV46_16680 | JV46_07630 | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.665 |
| JV46_16680 | cbbS | JV46_16680 | JV46_07620 | Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | Ribulose 1,5-bisphosphate carboxylase, small subunit CbbS. | 0.669 |
| JV46_21840 | cbbL | JV46_21840 | JV46_07630 | Carbonic anhydrases/acetyltransferase; Isoleucine patch superfamily. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.922 |
| JV46_21840 | cbbS | JV46_21840 | JV46_07620 | Carbonic anhydrases/acetyltransferase; Isoleucine patch superfamily. | Ribulose 1,5-bisphosphate carboxylase, small subunit CbbS. | 0.890 |
| JV46_28490 | JV46_05570 | JV46_28490 | JV46_05570 | Phosphoribulokinase. | Haloacid dehalogenase; Subfamily IA, variant 3 with third motif having DD or ED. | 0.557 |
| JV46_28490 | cbbL | JV46_28490 | JV46_07630 | Phosphoribulokinase. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.867 |
| JV46_28490 | cbbS | JV46_28490 | JV46_07620 | Phosphoribulokinase. | Ribulose 1,5-bisphosphate carboxylase, small subunit CbbS. | 0.914 |
| JV46_29420 | JV46_07600 | JV46_29420 | JV46_07600 | Hypothetical protein. | Nitric oxide reductase activation protein. | 0.778 |
| JV46_29420 | cbbL | JV46_29420 | JV46_07630 | Hypothetical protein. | Ribulose 1,5-bisphosphate carboxylase, large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. | 0.697 |
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