STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_08460Hypothetical protein. (98 aa)    
Predicted Functional Partners:
JV46_08450
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.821
JV46_08470
Parvulin-like peptidyl-prolyl isomerase.
       0.817
JV46_16940
Hypothetical protein.
    
  0.778
JV46_16950
Pyruvate:ferredoxin oxidoreductase-like protein, alpha subunit.
    
  0.778
JV46_08440
Hypothetical protein.
       0.715
JV46_08870
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Homodimeric.
     
  0.698
JV46_23640
Glutamate synthase (NADH), large subunit.
       0.659
JV46_03670
Metal-dependent phosphoesterase; PHP family.
  
    0.632
JV46_03650
Zn-dependent hydrolase, glyoxylase.
       0.521
tadA
tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.521
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.