STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_08980Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (271 aa)    
Predicted Functional Partners:
JV46_10750
Aeta-ketoacyl synthase; Belongs to the P-Pant transferase superfamily.
  
 0.973
JV46_06470
Hypothetical protein.
  
 0.965
JV46_06480
Thioesterase domain-containing protein; Contains thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
  
 
 0.963
JV46_23640
Glutamate synthase (NADH), large subunit.
    
  0.885
JV46_08970
Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
 
  
 0.860
JV46_23410
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.849
JV46_19150
Cytochrome P450.
   
 0.597
fabD
Malonyl CoA-(acyl-carrier-protein) transacylase; (Acyl-carrier-protein) S-malonyltransferase.
   
 
 0.566
fabH
3-ketoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
   
 
 0.563
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.518
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.