STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrA1Multidrug efflux pump AcrAB, subunit A1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (364 aa)    
Predicted Functional Partners:
acrB1
Multidrug efflux pump AcrAB, subunit B1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.987
tolC
Type I secretion outer membrane protein TolC.
 
 0.914
JV46_22520
Hypothetical protein.
  
 
 0.845
acrB2
Multidrug efflux pump AcrAB, subunit B2; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.797
JV46_20720
Hypothetical protein.
   
 0.780
acrB7
Multidrug efflux pump AcrAB, subunit B7; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.658
acrB3
Multidrug efflux pump AcrAB, subunit B3; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.654
acrB4
Multidrug efflux pump AcrAB, subunit B4; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.654
acrB6
Multidrug efflux pump AcrAB, subunit B6; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.620
acrB5
Multidrug efflux pump AcrAB, subunit B5; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.619
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.