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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_09480Glycosyltransferase. (377 aa)    
Predicted Functional Partners:
gbe
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.876
JV46_18240
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.849
JV46_09490
Putative translation initiation inhibitor; yjgF family.
  
    0.754
JV46_06470
Hypothetical protein.
 
 0.710
JV46_10750
Aeta-ketoacyl synthase; Belongs to the P-Pant transferase superfamily.
  
 
 0.685
JV46_06480
Thioesterase domain-containing protein; Contains thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
   
 
 0.612
JV46_09470
LmbE-like protein.
  
 
 0.598
JV46_23410
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
 0.535
JV46_04000
Hypothetical protein.
    
 
 0.500
JV46_09030
Hypothetical protein.
    
 
 0.500
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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