STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_09970Hypothetical protein. (456 aa)    
Predicted Functional Partners:
JV46_09980
D-alanine-D-alanine ligase-like protein.
       0.773
JV46_27650
Tol-pal system-associated acyl-CoA thioesterase.
  
 
 0.621
JV46_06420
Threonine dehydrogenase-like protein; Zn-dependent dehydrogenase.
    
  0.614
JV46_05630
UDP-N-acetylmuramyl tripeptide synthase.
 
     0.598
JV46_07560
Putative quinone oxidoreductase; YhdH/YhfP family.
    
 0.505
JV46_08970
Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
    
 0.505
JV46_09180
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.457
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.