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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_11280Hypothetical protein. (143 aa)    
Predicted Functional Partners:
soxY
Sulfur carrier protein SoxYZ subunit Y.
 
     0.716
soxX
Heterodimeric c-type cytochrome complex SoxAX, subunit X.
  
     0.711
JV46_20710
Thioredoxin-like protein.
  
     0.710
JV46_18170
Hypothetical protein; DUF1791 domain.
  
     0.708
JV46_12480
Hypothetical protein.
  
     0.696
soxB
Sulfate thiol-esterase SoxB; Belongs to the 5'-nucleotidase family.
 
     0.682
JV46_13820
Hypothetical protein.
  
     0.651
JV46_27740
YeeE/YedE family protein; Contains DUF395 domain.
  
     0.644
soxA
Heterodimeric c-type cytochrome comple SoxAX, subunit A.
  
     0.634
JV46_04520
Rhodanese-like sulfurtransferase.
  
     0.628
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.