STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_17710NTP binding protein; Contains STAS domain. (99 aa)    
Predicted Functional Partners:
JV46_17700
ABC-type transport system, auxiliary component.
  
 
 0.965
JV46_17690
ABC-type transport system, periplasmic component, UDP-N-acetylglucosamine1-carboxyvinyltransferase; UniRef90.
  
 0.941
JV46_17670
ABC-type transporter, ATPase component, ATPase component.
 
 0.937
JV46_17680
Integral membrane protein.
 
 0.918
ttg2D
ABC-type transport system Ttg2ACD, subunit D.
 
 
 0.781
ttg2C
ABC-type transport system Ttg2ACD, subunit C.
  
 0.738
ttg2A
ABC-type transport system Ttg2ACD, subunit A.
  
 0.727
JV46_19840
Integral membrane protein.
  
 0.647
JV46_19830
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
    
 0.612
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.580
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.