STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
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[Homology]
Score
napDPeriplasmic nitrate reductase napFDAGHBC, subunit D; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. (78 aa)    
Predicted Functional Partners:
napA
Periplasmic nitrate reductase napFDAGHBC, subunit A; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.997
napF
Periplasmic nitrate reductase napFDAGHBC, subunit F; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.
 
  
 0.994
napB
Periplasmic nitrate reductase napFDAGHBC, subunit B; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.985
napH
Periplasmic nitrate reductase napFDAGHBC, subunit H.
 
  
 0.975
fdoG
Formate dehydrogenase-O FdoGHI, subunit G; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.950
napG
Periplasmic nitrate reductase napFDAGHBC, subunit G.
 
  
 0.940
napC1
Periplasmic nitrate reductase napFDAGHBC, subunit C.
 
  
 0.889
napC2
Periplasmic nitrate reductase napFDAGHBC, subunit C.
 
  
 0.848
JV46_25140
nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit.
 
  
 0.848
JV46_19440
nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit.
 
  
 0.806
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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