STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sqrSulfide-quinone reductase Sqr. (375 aa)    
Predicted Functional Partners:
hox2F
Bidirectional hydrogenase H2FUYH, subunit 2F.
     
 0.811
fccA
Flavocytochrome c dehydrogenase FccAB, subunit A.
 
  
 0.795
rdsrP
Transmembrane electron transport complex rDsrKMJOP, subunit P.
  
  
  0.791
rdsrL
Transmembrane electron transport complex rDsrKMJOP, subunit L.
  
  
 0.789
fccB
Flavocytochrome c dehydrogenase FccAB, subunit B.
  
 
  0.788
rdsrK
Transmembrane electron transport complex rDsrKMJOP, subunit K.
  
 
  0.785
rdsrM
Transmembrane electron transport complex rDsrKMJOP, subunit M.
  
  
 0.782
dmsA
Dimethylsulfoxide reductase DmsABC, subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.782
rdsrJ
Transmembrane electron transport complex rDsrKMJOP, subunit J.
  
  
  0.773
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
   
 
 0.769
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.