STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hprKSerine kinase of the HPr protein; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). (319 aa)    
Predicted Functional Partners:
JV46_25850
Phosphotransferase; HPr (HPr) Family.
 
 
 
 0.925
ptsN
PTS IIA-like nitrogen-regulatory protein PtsN; Phosphotransferase system mannitol/fructose- specific IIA domain (Ntr-type).
 
  
 0.910
JV46_26020
SSU ribosomal protein S30P/sigma 54 modulation protein.
 
   
 0.813
JV46_25870
Phosphotransferase; Mannose-/fructose-specific component IIA.
 
   
 0.793
JV46_26070
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.770
JV46_25900
P-loop-containing kinase; Displays ATPase and GTPase activities.
     
 0.615
JV46_08870
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Homodimeric.
   
   0.589
JV46_16940
Hypothetical protein.
   
   0.589
JV46_16950
Pyruvate:ferredoxin oxidoreductase-like protein, alpha subunit.
   
   0.589
lptA
Lipopolysaccharide transport periplasmic protein LptA.
     
 0.532
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.