STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgtAP-type magnesium transporter MtgA. (951 aa)    
Predicted Functional Partners:
JV46_16880
Oxidoreductase NAD-binding domain containing-protein.
    
 0.786
JV46_29820
Oxidoreductase FAD/NAD(P)-binding domain-containing protein.
    
 0.786
JV46_06470
Hypothetical protein.
  
 
 0.594
JV46_26970
Hypothetical protein.
       0.545
JV46_06480
Thioesterase domain-containing protein; Contains thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
  
 
 0.498
atpA0D
A0A1-type ATP synthase, A0 subunit D.
    
  0.490
JV46_23410
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.473
atpA0I
A0A1-type ATP synthase, A1 subunit I; Belongs to the V-ATPase 116 kDa subunit family.
    
 0.461
JV46_10750
Aeta-ketoacyl synthase; Belongs to the P-Pant transferase superfamily.
  
 
 0.448
atpf1B
F0F1-type ATP synthase, F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.445
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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