STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_27040Rhodanese-like sulfurtransferase. (281 aa)    
Predicted Functional Partners:
JV46_05360
Cytochrome c.
  
 
 0.835
JV46_21860
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.793
JV46_16330
2-polyprenylphenol hydroxylase-like protein.
     
 0.735
JV46_10480
Nitrate reductase, transmembrane subunit; Quinol-dependent.
     
 0.685
JV46_12040
FAD/FMN-containing dehydrogenase.
    
  0.655
JV46_08050
Transcriptional regulator; ArsR family.
 
 
 0.634
ccoP
Cbb3-type cytochrome c oxidase CooNOQP, subunit P; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
  0.588
JV46_18140
Putative NAD(FAD)-dependent dehydrogenase.
   
 0.583
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
   
 0.566
JV46_18440
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.563
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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