STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_27770Hypothetical protein. (66 aa)    
Predicted Functional Partners:
copA2
P-type copper/silver transporter CopA2.
  
 
 0.904
JV46_05280
Hypothetical protein.
  
 
 0.872
zntA
P-type heavy metal transporter ZntA.
  
 
 0.872
JV46_05300
Hypothetical protein.
  
 
 0.872
copA1
P-type copper/silver transporter CopA1.
  
 
 0.872
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.741
JV46_11710
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.704
JV46_08050
Transcriptional regulator; ArsR family.
  
  
 0.524
JV46_27820
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
     
 0.519
JV46_27920
Cytochrome c oxidase, cbb3-type, subunit II.
       0.517
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.