STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_28010Zn-dependent peptidase; Belongs to the peptidase M16 family. (477 aa)    
Predicted Functional Partners:
hox2F
Bidirectional hydrogenase H2FUYH, subunit 2F.
   
 
 0.999
JV46_06470
Hypothetical protein.
  
 0.997
qcoA
Quinol:cytochrome-c oxidoreductase bc1, subunit A.
   
 0.997
qcoC
Quinol:cytochrome-c oxidoreductase bc1, subunit C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.996
JV46_28020
Zn-dependent peptidase.
  
0.990
qcoB
Quinol:cytochrome-c oxidoreductase bc1, subunit B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.988
JV46_23410
acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 0.982
JV46_06480
Thioesterase domain-containing protein; Contains thioesterase domain of type I polyketide synthase or non-ribosomal peptide synthetase.
   
 0.975
soxA
Heterodimeric c-type cytochrome comple SoxAX, subunit A.
   
 0.957
JV46_10750
Aeta-ketoacyl synthase; Belongs to the P-Pant transferase superfamily.
  
 
 0.949
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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