STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JV46_28210Protease; CAAX amino terminal. (297 aa)    
Predicted Functional Partners:
JV46_09590
Hypothetical protein.
  
     0.730
JV46_23980
EF hand domain-containing protein.
  
     0.654
JV46_17870
Redox protein.
  
     0.641
JV46_02640
PAS domain S-box-containing protein.
  
    0.621
JV46_23850
Hypothetical protein.
  
     0.620
JV46_08960
Hypothetical protein.
  
     0.593
JV46_24030
Hypothetical protein; DUF1239 domain.
  
     0.580
JV46_17600
Hypothetical protein.
  
     0.565
JV46_29000
Hypothetical protein.
  
     0.553
JV46_23800
Hypothetical protein.
  
     0.545
Your Current Organism:
Solemya velum
NCBI taxonomy Id: 2340
Other names: S. velum gill symbiont, Solemya velum gill symbiont, Solemya velum symbiont
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.