STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfdCOG2906 Bacterioferritin-associated ferredoxin. (64 aa)    
Predicted Functional Partners:
bfrA
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.901
ubiC
Polysaccharide synthesis-related protein; Target site duplication generated by insertion of ISSoEn2.
  
     0.739
ygiN
YgiN protein involved in menadione metabolism.
  
     0.647
ytfF
Putative transmembrane subunit; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.568
yiiD
GNAT family acetyltransferase YiiD potentially involved in tRNA processing; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.479
yheV
Putative cytoplasmic protein probably associated with Glutathione-regulated potassium-efflux; COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.449
SOPEG_3109
Enhanced serine sensitivity protein SseB; COG2897 Rhodanese-related sulfurtransferase; Thiosulfate sulfurtransferase rhodanese.
  
   
 0.448
AHF74057.1
Transposase, ISNCY ssgr ISPlu15 family.
  
     0.436
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
     
 0.427
rhaT
L-rhamnose-proton symporter.
  
     0.410
Your Current Organism:
Sodalis pierantonius
NCBI taxonomy Id: 2342
Other names: C. Sodalis pierantonius str. SOPE, Candidatus Sodalis pierantonius str. SOPE, SOPE, Sitophilus oryzae endosymbiont, Sitophilus oryzae primary endosymbiont, Sitophilus oryzae principal endosymbiont, primary endosymbiont of Sitophilus oryzae
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