Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF72952.1 | yhbP | SOPEG_0228 | SOPEG_0216 | Ner-like regulatory protein; COG3423 Predicted transcriptional regulator. | UPF0306 protein SOPEG_0216; Belongs to the UPF0306 family. | 0.433 |
| aaeB | mukB | SOPEG_3707 | SOPEG_2658 | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | 0.541 |
| aaeB | nadR | SOPEG_3707 | SOPEG_1280 | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | 0.586 |
| aaeB | pgpB | SOPEG_3707 | SOPEG_2539 | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | COG0671 Membrane-associated phospholipid phosphatase. | 0.565 |
| aaeB | tsx | SOPEG_3707 | SOPEG_0857 | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | Nucleoside-specific channel-forming protein Tsx; COG3248 Nucleoside-binding outer membrane protein. | 0.744 |
| aaeB | yhbP | SOPEG_3707 | SOPEG_0216 | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | UPF0306 protein SOPEG_0216; Belongs to the UPF0306 family. | 0.518 |
| aaeB | ytfN | SOPEG_3707 | SOPEG_1236 | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | COG2911 Uncharacterized protein conserved in bacteria. | 0.594 |
| mukB | aaeB | SOPEG_2658 | SOPEG_3707 | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | 0.541 |
| mukB | nadR | SOPEG_2658 | SOPEG_1280 | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | 0.654 |
| mukB | pgpB | SOPEG_2658 | SOPEG_2539 | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | COG0671 Membrane-associated phospholipid phosphatase. | 0.731 |
| mukB | tsx | SOPEG_2658 | SOPEG_0857 | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | Nucleoside-specific channel-forming protein Tsx; COG3248 Nucleoside-binding outer membrane protein. | 0.430 |
| mukB | yhbP | SOPEG_2658 | SOPEG_0216 | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | UPF0306 protein SOPEG_0216; Belongs to the UPF0306 family. | 0.566 |
| mukB | ytfN | SOPEG_2658 | SOPEG_1236 | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | COG2911 Uncharacterized protein conserved in bacteria. | 0.749 |
| nadR | aaeB | SOPEG_1280 | SOPEG_3707 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | 0.586 |
| nadR | mukB | SOPEG_1280 | SOPEG_2658 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | 0.654 |
| nadR | pgpB | SOPEG_1280 | SOPEG_2539 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | COG0671 Membrane-associated phospholipid phosphatase. | 0.784 |
| nadR | yhbP | SOPEG_1280 | SOPEG_0216 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | UPF0306 protein SOPEG_0216; Belongs to the UPF0306 family. | 0.485 |
| nadR | ytfN | SOPEG_1280 | SOPEG_1236 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein. | COG2911 Uncharacterized protein conserved in bacteria. | 0.470 |
| pgpB | aaeB | SOPEG_2539 | SOPEG_3707 | COG0671 Membrane-associated phospholipid phosphatase. | P-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. | 0.565 |
| pgpB | mukB | SOPEG_2539 | SOPEG_2658 | COG0671 Membrane-associated phospholipid phosphatase. | Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. | 0.731 |
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