STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF73350.1Putative MaoC-like protein; COG2030 Acyl dehydratase. (159 aa)    
Predicted Functional Partners:
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.806
caiD
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.799
birA
Biotin-protein ligase / Biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
  
    0.467
AHF73349.1
COG1309 Transcriptional regulator.
       0.446
gltA
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.439
AHF74471.1
Hypothetical protein.
  
     0.435
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.428
ycbX
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; COG3217 Uncharacterized Fe-S protein.
  
  
 0.422
poxB
Pyruvate dehydrogenase; Potential frameshift: common BLAST hit: gi|157369906|ref|YP_001477895.1| L-threonine aldolase; L-threonine aldolase; Belongs to the TPP enzyme family.
    
 0.422
AHF73402.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Sodalis pierantonius
NCBI taxonomy Id: 2342
Other names: C. Sodalis pierantonius str. SOPE, Candidatus Sodalis pierantonius str. SOPE, SOPE, Sitophilus oryzae endosymbiont, Sitophilus oryzae primary endosymbiont, Sitophilus oryzae principal endosymbiont, primary endosymbiont of Sitophilus oryzae
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