STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artPArginine ABC transporter ATP-binding protein ArtP; COG4161 ABC-type arginine transport system, ATPase component. (249 aa)    
Predicted Functional Partners:
artI
Arginine ABC transporter periplasmic arginine-binding protein ArtI; COG4215 ABC-type arginine transport system, permease component; arginine transporter permease subunit ArtQ; Belongs to the bacterial solute-binding protein 3 family.
 
  0.992
gltK
Glutamate Aspartate transport system permease protein GltK; COG0765 ABC-type amino acid transport system, permease component.
 
     0.904
cysU
Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.830
mdlA
Putative multidrug transporter membraneATP-binding components; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
     
0.797
abgB2
Polar amino acid ABC transporter, inner membrane subunit; COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; aminobenzoyl-glutamate utilization family protein.
  
 0.776
AHF73106.1
Polar amino acid ABC transporter inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
  
     0.712
glnP
Glutamate transport membrane-spanning protein; COG0765 ABC-type amino acid transport system, permease component.
  
     0.706
gltJ
Glutamate Aspartate transport system permease protein GltJ; COG0765 ABC-type amino acid transport system, permease component.
 
     0.684
cydD
Cysteine/glutathione ABC transporter membrane/ATP-binding component; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components.
 
    
0.620
SOPEG_3918
Extracellular solute-binding protein family 3; Potential frameshift: common BLAST hit: gi|153010841|ref|YP_001372055.1| polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit; Belongs to the bacterial solute-binding protein 3 family.
 
    0.614
Your Current Organism:
Sodalis pierantonius
NCBI taxonomy Id: 2342
Other names: C. Sodalis pierantonius str. SOPE, Candidatus Sodalis pierantonius str. SOPE, SOPE, Sitophilus oryzae endosymbiont, Sitophilus oryzae primary endosymbiont, Sitophilus oryzae principal endosymbiont, primary endosymbiont of Sitophilus oryzae
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