STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
aaeBP-hydroxybenzoic acid efflux subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. (652 aa)    
Predicted Functional Partners:
aaeA
P-hydroxybenzoic acid efflux subunit AaeA; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.946
aaeX
Efflux system membrane protein.
  
    0.759
tsx
Nucleoside-specific channel-forming protein Tsx; COG3248 Nucleoside-binding outer membrane protein.
  
     0.744
tsgA
Putative transporter; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase A (rotamase A).
  
     0.722
bamC
Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.652
ytfN
COG2911 Uncharacterized protein conserved in bacteria.
  
     0.594
nadR
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes; COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein.
  
     0.586
SOPEG_3109
Enhanced serine sensitivity protein SseB; COG2897 Rhodanese-related sulfurtransferase; Thiosulfate sulfurtransferase rhodanese.
  
     0.585
pgpB
COG0671 Membrane-associated phospholipid phosphatase.
  
     0.565
iap
Alkaline phosphatase isozyme conversion protein precursor; COG2234 Predicted aminopeptidases.
  
     0.558
Your Current Organism:
Sodalis pierantonius
NCBI taxonomy Id: 2342
Other names: C. Sodalis pierantonius str. SOPE, Candidatus Sodalis pierantonius str. SOPE, SOPE, Sitophilus oryzae endosymbiont, Sitophilus oryzae primary endosymbiont, Sitophilus oryzae principal endosymbiont, primary endosymbiont of Sitophilus oryzae
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