STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_0005PFAM: peptidase M20; peptidase M28; KEGG: gvi:gll4423 hypothetical protein. (550 aa)    
Predicted Functional Partners:
Acid_2797
PFAM: peptidase M28; KEGG: cps:CPS_2554 peptidase, M28 family.
  
     0.763
Acid_0004
KEGG: aba:Acid345_0768 tetratricopeptide repeat protein.
       0.737
Acid_3724
PFAM: peptidase M20; peptidase M28; KEGG: aba:Acid345_2940 peptidase M28.
  
     0.728
Acid_4278
PFAM: peptidase M20; peptidase M28; KEGG: mac:MA3216 bacterial leucyl aminopeptidase.
  
     0.724
Acid_2445
PFAM: peptidase M20; peptidase M28; KEGG: mxa:MXAN_0100 peptidase, M28D (aminopeptidase ES-62) subfamily.
  
     0.708
Acid_4844
PFAM: peptidase M2, peptidyl-dipeptidase A; KEGG: gvi:gll3143 similar to angiotensin-converting enzyme.
 
   
 0.698
Acid_5302
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: cps:CPS_1104 dipeptidyl peptidase IV.
  
    0.682
Acid_2626
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
  
 0.678
Acid_1823
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
  
 0.675
Acid_0034
Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
  
 0.668
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.