STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_0086PFAM: alpha/beta hydrolase fold; KEGG: ccr:CC0355 hydrolase, putative. (285 aa)    
Predicted Functional Partners:
Acid_0085
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gvi:glr1067 HlyB/MsbA family ABC transporter.
  
    0.630
Acid_1972
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase.
  
 
 0.620
Acid_6622
KEGG: gvi:gll1942 cytochrome P-450 like protein; Belongs to the cytochrome P450 family.
 
 
 0.470
Acid_2544
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV297 alpha/beta hydrolase.
  
     0.467
Acid_0087
KEGG: sma:SAV1480 putative electron transfer flavoprotein, alpha subunit.
       0.459
Acid_0088
KEGG: plt:Plut_1755 electron transfer flavoprotein beta subunit.
       0.459
Acid_4028
PFAM: metallophosphoesterase; KEGG: dra:DR0935 phosphatase, putative.
  
 
  0.433
Acid_2780
PFAM: cytochrome P450; KEGG: bsu:BG11528 cytochrome p450-like enzyme.
 
 
 0.419
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.