STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_0088KEGG: plt:Plut_1755 electron transfer flavoprotein beta subunit. (270 aa)    
Predicted Functional Partners:
Acid_0087
KEGG: sma:SAV1480 putative electron transfer flavoprotein, alpha subunit.
  
 0.978
Acid_3510
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_2406 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.922
Acid_1165
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: aba:Acid345_3700 electron transfer flavoprotein, alpha subunit.
  
 0.909
Acid_3079
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: gme:Gmet_2265 electron transfer flavoprotein, alpha subunit.
  
 0.909
Acid_5699
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: aba:Acid345_3700 electron transfer flavoprotein, alpha subunit.
  
 0.909
Acid_5546
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: aba:Acid345_2469 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 
 0.801
Acid_5696
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: aba:Acid345_2469 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 
 0.801
Acid_0685
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: psb:Psyr_1299 NADH:flavin oxidoreductase/NADH oxidase.
  
 
 0.719
Acid_0040
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: aba:Acid345_0610 acyl-CoA dehydrogenase-like.
  
 
 0.697
Acid_0094
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mpa:MAP0150c putative acyl-CoA dehydrogenase.
  
 
 0.697
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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