Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acid_0102PFAM: Ankyrin; KEGG: mfa:Mfla_1887 ankyrin. (281 aa)    
Predicted Functional Partners:
Acid_7880
PFAM: Ankyrin; KEGG: afm:Afu1g01020 hypothetical protein.
  
     0.769
Acid_2033
Ankyrin; KEGG: ava:Ava_4314 ankyrin.
  
     0.768
Acid_6845
FOG: Ankyrin repeat-like protein; KEGG: ani:AN1130.2 hypothetical protein.
  
     0.768
Acid_5338
PFAM: Ankyrin; KEGG: mfa:Mfla_1887 ankyrin.
  
     0.767
Acid_1210
PFAM: Ankyrin; KEGG: neu:NE1049 ankyrin-repeat.
  
     0.766
Acid_1108
PFAM: Ankyrin; Planctomycete cytochrome C; KEGG: ani:AN8019.2 hypothetical protein.
  
     0.763
Acid_5825
KEGG: rba:RB601 ankyrin-related protein.
  
     0.751
Acid_0101
Hypothetical protein.
       0.741
Acid_3655
PFAM: CBS domain containing protein; Cl- channel, voltage-gated family protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_1863 Cl-channel, voltage gated.
   
 0.741
Acid_7343
Ankyrin; KEGG: dge:Dgeo_1884 ankyrin.
  
     0.733
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.