node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acid_0132 | Acid_0326 | Acid_0132 | Acid_0326 | KEGG: aba:Acid345_1188 hypothetical protein. | PFAM: carbon storage regulator; KEGG: tte:TTE0498 Carbon storage regulator (could also regulate swarming and quorum sensing). | 0.767 |
Acid_0132 | Acid_3434 | Acid_0132 | Acid_3434 | KEGG: aba:Acid345_1188 hypothetical protein. | Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | 0.834 |
Acid_0132 | Acid_6730 | Acid_0132 | Acid_6730 | KEGG: aba:Acid345_1188 hypothetical protein. | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bja:bll4069 exodeoxyribonuclease III. | 0.837 |
Acid_0132 | Acid_7397 | Acid_0132 | Acid_7397 | KEGG: aba:Acid345_1188 hypothetical protein. | TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; regulatory protein, LacI; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: aba:Acid345_1662 sigma-54, RpoN. | 0.501 |
Acid_0132 | clpP | Acid_0132 | Acid_3900 | KEGG: aba:Acid345_1188 hypothetical protein. | ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.488 |
Acid_0132 | clpX | Acid_0132 | Acid_2026 | KEGG: aba:Acid345_1188 hypothetical protein. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.827 |
Acid_0132 | ftsH | Acid_0132 | Acid_7074 | KEGG: aba:Acid345_1188 hypothetical protein. | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.487 |
Acid_0132 | hfq | Acid_0132 | Acid_1162 | KEGG: aba:Acid345_1188 hypothetical protein. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.900 |
Acid_0132 | miaA | Acid_0132 | Acid_1297 | KEGG: aba:Acid345_1188 hypothetical protein. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.633 |
Acid_0132 | pnp | Acid_0132 | Acid_7759 | KEGG: aba:Acid345_1188 hypothetical protein. | 3' exoribonuclease; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.657 |
Acid_0326 | Acid_0132 | Acid_0326 | Acid_0132 | PFAM: carbon storage regulator; KEGG: tte:TTE0498 Carbon storage regulator (could also regulate swarming and quorum sensing). | KEGG: aba:Acid345_1188 hypothetical protein. | 0.767 |
Acid_0326 | hfq | Acid_0326 | Acid_1162 | PFAM: carbon storage regulator; KEGG: tte:TTE0498 Carbon storage regulator (could also regulate swarming and quorum sensing). | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.767 |
Acid_3434 | Acid_0132 | Acid_3434 | Acid_0132 | Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | KEGG: aba:Acid345_1188 hypothetical protein. | 0.834 |
Acid_3434 | hfq | Acid_3434 | Acid_1162 | Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.834 |
Acid_6730 | Acid_0132 | Acid_6730 | Acid_0132 | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bja:bll4069 exodeoxyribonuclease III. | KEGG: aba:Acid345_1188 hypothetical protein. | 0.837 |
Acid_6730 | hfq | Acid_6730 | Acid_1162 | TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bja:bll4069 exodeoxyribonuclease III. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.837 |
Acid_7397 | Acid_0132 | Acid_7397 | Acid_0132 | TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; regulatory protein, LacI; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: aba:Acid345_1662 sigma-54, RpoN. | KEGG: aba:Acid345_1188 hypothetical protein. | 0.501 |
Acid_7397 | hfq | Acid_7397 | Acid_1162 | TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; regulatory protein, LacI; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: aba:Acid345_1662 sigma-54, RpoN. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.559 |
clpP | Acid_0132 | Acid_3900 | Acid_0132 | ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | KEGG: aba:Acid345_1188 hypothetical protein. | 0.488 |
clpP | clpX | Acid_3900 | Acid_2026 | ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.996 |