Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_0147PFAM: GCN5-related N-acetyltransferase; KEGG: aba:Acid345_2451 GCN5-related N-acetyltransferase. (172 aa)    
Predicted Functional Partners:
Acid_0145
PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc0120 hypothetical protein.
 
 
0.832
Acid_0151
PFAM: phage Tail Collar domain protein; KEGG: mlo:mll4442 microcystin dependent protein MdpB.
 
     0.812
Acid_0149
PFAM: phage Tail Collar domain protein; KEGG: mlo:mll4441 microcystin dependent protein MdpB.
 
     0.792
Acid_0146
KEGG: aba:Acid345_2452 hypothetical protein.
       0.780
Acid_0150
PFAM: phage Tail Collar domain protein; KEGG: aba:Acid345_2454 phage tail collar.
 
     0.779
Acid_0144
Conserved hypothetical protein; KEGG: gvi:glr0868 unknown protein.
       0.732
Acid_4328
TIGRFAM: conserved repeat domain; KEGG: cyb:CYB_1569 conserved repeat domain protein.
  
     0.592
Acid_0148
Hypothetical protein.
       0.565
Acid_2621
TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: cyb:CYB_1569 conserved repeat domain protein.
  
     0.540
Acid_0584
TIGRFAM: conserved repeat domain; KEGG: cyb:CYB_1569 conserved repeat domain protein.
  
     0.507
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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