Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_0232PFAM: protein of unknown function DUF877; KEGG: hypothetical protein. (495 aa)    
Predicted Functional Partners:
Acid_0231
PFAM: Uncharacterised conserved protein UCP028301; KEGG: csa:Csal_2268 uncharacterised conserved protein UCP028301.
 
 0.999
Acid_0233
PFAM: protein of unknown function DUF796; KEGG: bpm:BURPS1710b_A2076 hypothetical protein.
 
 
 0.986
Acid_0237
PFAM: protein of unknown function DUF879; KEGG: psb:Psyr_4956 protein of unknown function DUF879.
 
  
 0.978
Acid_0234
PFAM: virulence protein, SciE type; KEGG: pae:PA0086 hypothetical protein.
 
  
 0.977
Acid_0224
KEGG: psb:Psyr_4961 hypothetical protein.
 
  
 0.971
Acid_0236
PFAM: protein of unknown function DUF1316; KEGG: hch:HCH_04250 hypothetical protein.
 
  
 0.949
Acid_0223
PFAM: ImcF domain protein; KEGG: pae:PA0077 hypothetical protein.
 
  
 0.944
Acid_0235
PFAM: ImpA domain protein; KEGG: cvi:CV3963 hypothetical protein.
 
  
 0.943
Acid_0238
PFAM: protein of unknown function DUF1305; KEGG: psb:Psyr_4957 protein of unknown function DUF1305.
 
  
 0.917
Acid_0225
PFAM: protein of unknown function DUF876; KEGG: reu:Reut_B5264 protein of unknown function DUF876, bacterial.
  
 0.913
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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